Metabolic Systems Research Team

Laboratories

Publications

2019

Kozuka, T., Sawada, Y., Imai, H., Kanai, M., Hirai, M.Y., Mano, S., Uemura, M., Nishimura, M., Kusaba, M. and Nagatani, A.(2019) Regulation of sugar and storage oil metabolism by phytochrome during de-etiolation Plant Physiology, 181(3), DOI: 10.1104/pp.19.00535.

Abstract

Boerzhijin, S., Makino, Y., Hirai, M.Y., Sotome, I. and Yoshimura, M.(2019) Effect of perforation-mediated modified atmosphere packaging on the quality and bioactive compounds of soft kale (Brassica oleracea L. convar. acephala (DC) Alef. var. sabellica L.) during storage Food Packaging and Shelf Life, 23 ; 100427, DOI: 10.1016/j.fpsl.2019.100427.

Abstract

Sawada, Y., Sato, M., Okamoto, M., Masuda, J., Yamaki, S., Tamari, M., Tanokashira, Y., Kishimoto, S., Ohmiya, A., Abe, T. and Hirai, M.Y.(2019) Metabolome-based discrimination of chrysanthemum cultivars for the efficient generation of flower color variations in mutation breeding. Metabolomics, 15(9) ; 118, DOI: 10.1007/s11306-019-1573-7.

Abstract

Sugiyama, R. and Hirai, M.Y.(2019) Atypical Myrosinase as a Mediator of Glucosinolate Functions in Plants.Front Plant Sci. , 15(9) ; 118, DOI: 10.1007/s11306-019-1573-7.

Abstract

Nakajima, T., Kawano, Y., Ohtsu, I., Maruyuama-Nakashita, A., Allahham, A., Sato, M., Sawada, Y., Hirai, M.Y., Yokoyama, T. and Ohkama-Ohtsu, N.(2019) Effects of Thiosulfate as a Sulfur Source on Plant Growth, Metabolites Accumulation and Gene Expression in Arabidopsis and Rice. Plant Cell Physiol., 10 ; 1008, DOI: 10.3389/fpls.2019.01008. eCollection 2019.

Abstract

Onda, Y., Inoue, K., Sawada, Y., Shimizu, M., Takahagi, K., Uehara-Yamaguchi, Y., Hirai, M.Y., Garvin, D.F. and Mochida, K.(2019) Genetic Variation for Seed Metabolite Levels in Brachypodium distachyon. Int J. Mol Sci., 20(9) ; pii: E2348, DOI: 10.3390/ijms20092348.

Abstract

Okamura, Y., Tsuzuki, N., Kuroda, S., Sato, A., Sawada, Y., Hirai, M.Y. and Murakami, M.(2019) Interspecific Differences in the Larval Performance of Pieris Butterflies (Lepidoptera: Pieridae) Are Associated with Differences in the Glucosinolate Profiles of Host Plants. J Insect Sci. , 19(3) ; pii: 2, DOI: 10.1093/jisesa/iez035.

Abstract

Okamura, Y,. Sato, A., Tsuzuki, N., Sawada, Y., Hirai, M.Y., Heidel-Fischer, H., Reichelt, M., Murakami, M. and Vogel, H.(2019) Differential regulation of host plant adaptive genes in Pieris butterflies exposed to a range of glucosinolate profiles in their host plants. Sci Rep. , 9(1) ; 7256, DOI: 10.1038/s41598-019-43703-8.

Abstract

Nakazaki, A., Yamada, K., Kunieda, T., Sugiyama, R., Hirai, M.Y., Tamura, K., Hara-Nishimura, I. and Shimada, T.(2019) Leaf Endoplasmic Reticulum Bodies Identified in Arabidopsis Rosette Leaves Are Involved in Defense against Herbivory. Plant Physiol., 179(4) ; 1515-1524, DOI: 10.1104/pp.18.00984.

Abstract

Abdelrahman, M., Hirata, S., Sawada, Y., Hirai, M.Y., Sato, S., Hirakawa, H., Mine, Y., Tanaka. K. andShigyo, M.(2019) Widely targeted metabolome and transcriptome landscapes of Allium fistulosum-A. cepa chromosome addition lines revealed a flavonoid hot spot on chromosome 5A. Sci Rep., 9(1) ; 3541, DOI: 10.1038/s41598-019-39856-1.

Abstract

Tada, Y., Kawano, R., Komatsubara, S., Nishimura, H., Katsuhara, M., Ozaki, S., Terashima, S., Yano, K., Endo, C., Sato, M., Okamoto, M., Sawada, Y., Hirai, M.Y. and Kurusu, T.(2019) Functional screening of salt tolerance genes from a halophyte Sporobolus virginicus and transcriptomic and metabolomic analysis of salt tolerant plants expressing glycine-rich RNA-binding protein.Plant Sci. , 278 ; 54-63, DOI: 10.1016/j.plantsci.2018.10.019.

Abstract

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2018

Original Papers

Hirai, M.Y. and Shiraishi, F.(2018) Using metabolome data for mathematical modeling of plant metabolic systems.Curr Opin Biotechnol. , 54 ; 138-144, DOI: 10.1016/j.copbio.2018.08.005.

Abstract

Kawade, K., Li, Y., Koga, H., Sawada, Y., Okamoto, M., Kuwahara, A., Tsukaya, H. and Hirai, M.Y.(2018) The cytochrome P450 CYP77A4 is involved in auxin-mediated patterning of the Arabidopsis thaliana embryo.Development. , 145(17), DOI: 10.1242/dev.168369.

Abstract

Akashi, H., Okamura, E., Nishihama, R.,Kohchi, T., and Hirai, M.Y.(2018) Identification and Biochemical Characterization of the Serine Biosynthetic Enzyme 3-Phosphoglycerate Dehydrogenase in Marchantia polymorpha. Front. Plant Sci., DOI: 10.3389/fpls.2018.00956.

Abstract

Vergara, F., Itouga, M., Becerra, R.G., Hirai, M.Y., Ordaz-Ortiz, J.J., and Winkler, R.(2018) Funaria hygrometrica Hedw. elevated tolerance to D2O: its use for the production of highly deuterated metabolites. Planta., 247 ; 405-412, DOI: 10.1007/s00425-017-2794-5.

Abstract

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2017

Original Papers

Arae, T., Isai, S., Sakai, A., Mineta, K., Hirai, M.Y., Suzuki, Y., Kanaya, S., Yamaguchi, J., Naito, S. and Chiba, Y. (2017) Co-ordinated Regulations of mRNA Synthesis and Decay during Cold Acclimation in Arabidopsis Cells. Plant and Cell Physiology, 58 : 1090-1102, DOI: 10.1093/pcp/pcx059.

Abstract

Miwa, A., Sawada, Y., Tamaoki, D., Hirai, M.Y., Kimura, M., Sato, K. and Nishiuchi, T. (2017) Nicotinamide mononucleotide and related metabolites induce disease resistance against fungal phytopathogens in Arabidopsis and barley. Scientific Reports, 7 : 6389, DOI: 10.1038/s41598-017-06048-8.

Abstract

Vergara, F., Rymen, B., Kuwahara, A., Sawada, Y., Sato, M. and Hirai, M.Y. (2017) Autopolyploidization, geographic origin, and metabolome evolution in Arabidopsis thaliana. Am. J. Bot., 104(5), DOI: 10.3732/ajb.1600419.

Abstract

Okamura, E. and Hirai, M.Y. (2017) Novel regulatory mechanism of serine biosynthesis associated with 3-phosphoglycerate dehydrogenase in Arabidopsis thaliana. Sci. Rep., 7 : 3533, DOI: 10.1038/s41598-017-03807-5.

Abstract

Sawada, Y., Tsukaya, H., Li, Y., Sato, M., Kawade, K. and Hirai, M.Y. (2017) A novel method for single-grain-based metabolic profiling of Arabidopsis seed. Metabolomics, 13 : 75, DOI: 10.1007/s11306-017-1211-1.

Abstract

Osanai, T., Kuwahara, A., Otsuki, H., Saito, K. and Hirai, M.Y. (2017) ACR11 is an activator of plastid-type glutamine synthetase GS2 in Arabidopsis thaliana. Plant Cell Physiol., DOI: 10.1093/pcp/pcx033.

Abstract

Takeya, M., Hirai, M.Y. and Osanai, T. (2017) Allosteric inhibition of phosphoenolpyruvate carboxylases is determined by a single amino acid residue in cyanobacteria. Sci. Rep., 7 : 41080, DOI: 10.1038/srep41080.

Abstract

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