代謝システム研究チーム

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実績

2024

巻頭言(エディトリアル)

Li-Beisson, Y., Hirai, M.Y., Nakamura, Y. (2024) Plant metabolomics. Journal of Experimental Botany 75: 1651–1653.

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原著論文

Nguyen, P.N., Do, T.Y., Do, T.N., Gontier, E., Nguyen, H.T.L., Thi, V.A.L., Mai, N.T.P., Sato, M., Hirai, M.Y. and Nguyen, K.-O.T.(2024) Widely targeted metabolomics reveals the species-specific, matureness-specific and post-harvest-specific discriminations in the chemical profiles of Vietnamese endemic golden camellias. Int J Food Sci Technol. DOI:10.1111/ijfs.17071

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Uzaki,M., Mori,T., Sato,M., Wakazaki,M., Takeda-Kamiya,N., Yamamoto,K., Murakami, A.,Guerrero, D.A.S., Shichijo,C., Ohnishi,M., Ishizaki,K., Fukaki,H., O'Connor, S.E., Toyooka,K., Mimura,T. and Hirai, M.Y.(2024) Integration of cell differentiation and initiation of monoterpenoid indole alkaloid metabolism in seed germination of Catharanthus roseus. New Phytol. DOI:10.1111/nph.19662

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Miyaji, S., Ito, T., Kitaiwa, T., Nishizono, K., Agake, S.-I., Harata, H., Aoyama, H., Umahashi, M., Sato, M., Inaba, J., Fushinobu, S., Yokoyama, T., Murayama-Nakashita, A., Hirai, M.Y. and Ohkama-Ohtsu, N.(2024) N2-Acetylornithine deacetylase functions as a Cys-Gly dipeptidase in the cytosolic glutathione degradation pathway in Arabidopsis thaliana Plant J.. DOI:10.1111/tpj.16700.

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Wang, M., Tabeta, H., Ohtaka, K., Kuwahara, A., Nishihama, R., Ishikawa, T., Toyooka, K., Sato, M., Wakazaki, M., Akashi, H., Tsugawa, H., Shoji, T., Okazaki, Y., Yoshida, K., Sato, R., Ferjani, A., Kohchi, T., Hirai, M.Y. (2024) The phosphorylated pathway of serine biosynthesis affects sperm, embryo, and sporophyte development, and metabolism in Marchantia polymorpha. Commun Biol. DOI:10.1038/s42003-023-05746-6.

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2023

巻頭言(エディトリアル)

Hirai, M.Y., Mizutani, M. and Nakamura, Y.(2023) Revisiting Plant Metabolite Functions. Plant Cell Physiol.,DOI:10.1093/pcp/pcad155.

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原著論文

Horikoshi, M., Harada, K., Tsuno, S., Kitaguchi, T., Hirai, M.Y., Matsumoto, M., Terada, S. and Tsuboi, T.(2023)Distinct lactate metabolism between hepatocytes and myotubes revealed by live cell imaging with genetically encoded indicators.Biochem Biophys Res Commun.,DOI:10.1016/j.bbrc.2023.149416.

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Nguyen, K.-O.T., Do, T.-N, Dang, K.-P., Sato, M. and Hirai, M.Y.(2023)Single-grain-based widely targeted metabolomics profiling of sixty-four accessions of Japanese wild soybean (Glycin soja Sieb. Et Zucc.). IFST.,DOI:10.1111/ijfs.16654.

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Tsuno, S., Harada, K., Horikoshi.M., Mita, M., Kitaguchi, T., Hirai, M.Y., Matsumoto, M. and Tsuboi, T.(2023) Mitochondrial ATP concentration decreases immediately after glucose administration to glucose-deprived hepatocytes. FEBS Open Bio.,DOI:10.1002/2211-5463.13744.

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Kawade, K., Tabeta, H., Ferjani, A. and Hirai, M.Y.(2023) The Roles of Functional Amino Acids in Plant Growth and Development. Plant Cell Physiol.,DOI:10.1093/pcp/pcad071.

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Uchida, K., Kim, J.S., Sato, M., Tabeta, H., Mochida, K. and Hirai, M.Y.(2023) A metabolome genome-wide association study implicates histidine N-pi-methyltransferase as a key enzyme in N-methylhistidine biosynthesis in Arabidopsis thaliana. Front. Plant Sci.,DOI:10.3389/fpls.2023.1201129.

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Fuji, Y., Uchida, K., Akashi, T., Ohtsuki, T., Matsufuji, H. and Hirai, M.Y.(2023) Molecular Identification of UDP-Sugar Dependent Glycosyltransferase and Acyltransferase Involved in the Phenylethanoid Glycoside Biosynthesis Induced by Methyl Jasmonate in Sesamum indicum L. Plant Cell Physiol.,DOI:10.1093/pcp/pcad053.

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Miyamoto, H., Shigeta, K., Suda, W., Ichihashi, Y., Nihei, N., Matsuura, M., Tsuboi, A., Tominaga, N., Aono, M., Sato, M., Taguchi, S., Nakaguma, T., Tsuji, N., Ishii, C., Matsushita, T., Shindo, C., Ito, T., Kato, T., Kurotani, A., Shima, H., Moriya, S., Wada, S., Horiuchi, S., Satoh, T., Mori, K., Nishiuchi, T., Miyamoto, H., Kodama, H., Hattori, M., Ohno, H., Kikuchi, K. and Hirai, M.Y.(2023) An agroecological structure model of compost—soil—plant interactions for sustainable organic farming. ISME Commun,DOI:10.1038/s43705-023-00233-9.

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Uchida, K. and Hirai, M.Y.(2023) A simple method for creating transgenic pea hairy roots using a Japanese pea cultivar and a Japanese Rhizobium radiobacter strain. Plant Biotechnol., DOI:10.5511/plantbiotechnology.22.1219c

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Tojo, H., Tabeta, H., Gunji, S., Hirai, M.Y., David, P., Javot, H. and Ferjani, A.(2023) Roles of type II H+-PPases and PPsPase1/PECP2 in early developmental stages and PPi homeostasis of Arabidopsis thalianaFront. Plant Sci., 14:1031426., DOI:10.3389/fpls.2023.1031426

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Tabeta, H., Gunji, S., Kawade, K. and Ferjani, A.(2023) Leaf-size control beyond transcription factors: Compensatory mechanismsFront. Plant Sci., 13:1024945., DOI:10.3389/fpls.2022.1024945

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Toyooka, K., Goto,Y., Hashimoto, K., Wakazaki, M., Sato, M. and Hirai, M.Y.(2023) Endoplasmic Reticulum Bodies in the Lateral Root Cap are Involved in the Direct Transport of Beta-Glucosidase to Vacuoles. Plant and Cell Physiology, pcac177, DOI:10.1093/pcp/pcac177

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2022

原著論文

Matsuse, K., Abdelrahman, M., Ariyanti, N. A., Tsuji, F., Hirata, S., Nakajima, T., Sato, M., Hirai, M.Y., Manochai, B. and Shigyo, M.(2022) Targeted Metabolome Profiling of Indonesian Shallots and Japanese Long-Day/Short-Day Bulb Onions. Merabolites, DOI:10.3390/metabo12121260

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Tabeta, H., Higashi, Y., Okazaki, Y., Toyooka, K., Wakazaki, M., Sato, M., Saito, K., Hirai, M.Y. and Ferjani, A. (2022) Skotomorphogenesis exploits threonine to promote hypocotyl elongation. Quantitative Plant Biology, DOI:10.1017/qpb.2022.19

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Guo, L., Zhao, W., Wang, Y., Yang, Y., Wei, C., Guo, J., Dai, J., Hirai, M.Y., Bao, A., Yang, Z., Chen, H. and Li, Y. (2022) Heterologous biosynthesis of isobavachalcone in tobacco based on in planta screening of prenyltransferases.Frontiers in Plant Science, DOI:10.3389/fpls.2022.1034625

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Bashir, K., Todaka, D., Rasheed, S., Matsui, A., Ahmad, Z., Sako, K., Utsumi, Y., Vu, A.T., Tanaka, M., Takahashi, S., Ishida, J., Tsuboi, Y., Watanabe, S., Kanno, Y., Ando, E., Shin, K-C., Seito, M., Motegi, H., Sato, M., Li, R., Kikuchi, S., Fujita, M., Kusano, M., Kobayashi, M., Habu, Y., Nakano, A., Kawaura, K., Kikuchi, J., Saito, K., Hirai, M.Y., Seo, M., Shinozaki, K., Kinoshita, T. and Seki, M. (2022) Ethanol-Mediated Novel Survival Strategy against Drought Stress in Plants. Plant Cell Physiol., DOI:10.1093/pcp/pcac114.

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Gunji, S., Kawade, K., Tabeta, H., Horiguchi, G., Oikawa, A., Asaoka, M., Hirai, M.Y.,Tsukaya, H. and Ferjani, A. (2022) Tissue-targeted PPi hydrolysis in a fugu5 mutant reveals that excess PPi triggers developmental defects in a cell-autonomous manner.Frontiers in Plant Science, DOI:10.3389/fpls.2022.945225

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Ito, T., Kitaiwa,T., Nishizono, K.,Umahashi, M., Miyaji, S.,Agake, S., Kuwahara, K., Yokoyama, T., Fushinobu, S., Maruyama-Nakashita, A., Sugiyama, R., Sato, M., Inaba, J., Hirai, M.Y. and Ohkama-Ohtsu, N. (2022) Glutathione degradation activity of γ‐glutamyl peptidase 1 manifests its dual roles in primary and secondary sulfur metabolism in Arabidopsis. The Plant Journal, DOI:10.1111/tpj.15912

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Kurihara, O.E., Ali, A., Hiramoto, M., Kurihara, Y., Abouleila, Y., Abdelazem, E.M., Kawai, T., Makita, Y., Kawashima, M., Esaki, T., Shimada, H., Mori,T., Hirai, M.Y., Higaki, T., Hasezawa, S., Shimizu, Y., Masujima, T. and Matsui, M.(2022) Tracking metabolites at single-cell resolution reveals metabolic dynamics during plant mitosis. Plant Physiol., 189: 459–464, DOI:10.1093/plphys/kiac093

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Uzaki, M., Yamamoto, K., Murakami, A., Fuji, Y., Ohnishi, M., Ishizaki, K., Fukaki, H., Hirai, M.Y. and Mimura, T.(2022) Differential regulation of fluorescent alkaloid metabolism between idioblast and lacticifer cells during leaf development in Catharanthus roseus seedlings. J. Plant Res., DOI:10.1007/s10265-022-01380-1

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Siriwach, R., Matsuzaki, J., Saito, T., Nishimura, H., Isozaki, M., Isoyama, Y., Sato, M., Arita, M., Akaho, S., Higashide, T., Yano, K., and Hirai, M.Y.(2022) Assessment of greenhouse tomato anthesis rate through metabolomics using LASSO regularized linear regression model. Front. Mol. Biosci.9: 839051, DOI: 10.3389/fmolb.2022.839051

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Nishiumi, S., Izumi, Y., Hirayama, A., Takahashi, M., Nakao, M., Hata, K., Saigusa, D., Hishinuma, E., Matsukawa, N., Tokuoka, S.M., Kita, Y., Hamano, F., Okahashi, N., Ikeda, K., Nakanishi, H., Saito, K., Hirai, M.Y., Yoshida, M., Oda, Y. and Matsuda, M.(2022) Comparative Evaluation of Plasma Metabolomic Data from Multiple Laboratories. Metabolites, DOI:10.3390/metabo12020135

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